Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853131.1_cds_XP_016512113.1_24785
CDS Infomation

[gene=LOC107829166] [db_xref=GeneID:107829166] [protein=U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1] [protein_id=XP_016512113.1] [location=join(28845..28847,31129..31194,32560..32691,33129..34021,34168..34238,34789..34891,35055..35130,36355..36462)] [gbkey=CDS]
Sequence

ATGGCAACTCTTGCTGATTCTTTCCTGGCAGATCTGGACGAGTTGTCAGACAATGATGCT
GATGTTCTTGATGAGGAGAATCTTGATGCTGAGCATATGGAGGAAGACGGAGACTTGGCA
GACTTAGAAGCACTAAATTATGACGATCTAGATAATGTTTCCAAGCTGCTAAAATCACGT
CGCTACATTGACATAATGCAGAAAGTTGAAGATGCACTTGAGAAGGAGTCCGATGTCACG
AATAGAGGTATTGTTCTCGAAGATGATCCAGAGTATCAGTTGATAGTAGACTGTAATGCC
TTATCAGTTGACATTGAGAATGAAATTGTTATAATCCACAATTTCATACGCGACAAGTAT
CGATTGAAATTCCCTGAGTTAGAGTCACTTGTTCATCACCCAATTGATTATGCTCGGGTT
GTTAAGAAGATTGGCAATGAAATGGATCTGACTCTTGTTGACTTGGAAGGATTGCTACCC
TCAGCTATCATCATGGTTGTCTCTGTTACGGCATCAACTACCAGTGGCAAGCCATTGCCA
GAAGATGTTTTACAAAAGACAGTGGAAGCATGTGATAGAGCCCTTGCTCTTGATTCAGCA
AAGAAAAAGGTTCTTGATTTTGTTGAGAGTCGAATGGGATATATTGCTCCCAATCTTTCT
GCTGTAGTTGGGAGCGCAGTTGCTGCAAAACTTATGGGTACTGCTGGTGGTCTCTCGTCA
TTGGCAAAAATGCCTGCTTGTAATGTCCAGCTTCTTGGTGCCAAAAAGAAGACTTTAGCA
GGGTTCTCCACAGCAACTTCCCAATTTCATGTGGGTTATATTGAGCAAACAGAAACATTT
CAGAGTACACCTCCTTCCTTGAGGATGCGGGCCGTTAGACTGCTGGCAGCAAAATCTACA
TTAGCGGCACGCGTGGATTCAATCAGCGGAGACCCGACTGGAAAAACTGGAAGAACTCTT
AGGGAAGAGATCCAGAAAAAGATAGAGAAATGGCAAGAGCCACCTCCTGCAAAGCAGCCA
AAGCCTCTTCCAGTTCCTGATTCTGAGCCTAAGAAAAAGAGAGGTGGTCGTCGTCTGAGA
AAGATGAAGGAAAGATATGCTATCACGGACATGCGGAAGCTAGCAAACAGGATGCAGTTT
GGAGTACCTGAAGAAAGCTCCTTAGGGGATGGACTAGGGGAGGGCTACGGCATGCTTGGT
CAGGCTGGAAGCGGCAAGTTGCGTGTATCAGTTGGTCAAAGCAAGCTTGCTGCCAAAGTA
GCAAAGAAATTCAAGGAGAAGAGTTATGGAAGCAGTGGTGCCACATCAGGGTTGACTTCA
AGTTTGGCCTTCACCCCAGTGCAAGGGATCGAGCTATCAAATCCTCAGGCGCTTGCAAAT
CAGCTTGGCAGCGGAACGCAAAGCACCTATTTCTCTGAGACTGGAACGTTTTCTAAGATT
AAGAGAACATGA

Peptide Sequence

PEP ID

XP_016512113.1
PEP Infomation

PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1 [Nicotiana tabacum]
Sequence

MATLADSFLADLDELSDNDADVLDEENLDAEHMEEDGDLADLEALNYDDLDNVSKLLKSR
RYIDIMQKVEDALEKESDVTNRGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKKKTLAGFSTATSQFHVGYIEQTETFQSTPPSLRMRAVRLLAAKST
LAARVDSISGDPTGKTGRTLREEIQKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTFSKI
KRT

Transcript Sequence

Gene sequence data has not been registered.